circRNA basic information
circBase ID: -
Name: hsa_circ_LPHN2
Synonym: CircRNA_100269
Host Gene: LPHN2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent non-cancerous tissue samples

Cell lines:

AGS; MKN28; MKN45; BGC823; MGC803; SGC7901; GES1

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-630
Biological function: Suppresses GC cell proliferation/tumor cell growth.
Molecular mechanism: Direct binding to miR-630 (miRNA sponge-like interaction), negatively regulating miR-630; miR-630 mimics reverse the anti-proliferative effect of circRNA_100269.
Biological pathway or process:

proliferation (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Lower circRNA_100269 in tumor (negative group) is associated with worse overall survival; expression correlates with histological subtypes and node invasion number.

Description:

circRNA_100269 is down-regulated in gastric cancer tissues and GC cell lines. It directly interacts with miR-630, negatively correlates with miR-630 in tissues, and its overexpression inhibits GC cell proliferation; this anti-proliferative effect is reversed by miR-630 mimics.

Confidence score:

0.7544

Other information
Title:

CircRNA_100269 is downregulated in gastric cancer and suppresses tumor cell growth by targeting miR-630.

Journal: Aging
Published: 2017
PubMed ID: 28657541
Study type:

combined biological and clinical study

Data availability: -
Code availability: -