circRNA basic information
circBase ID: -
Name: hsa_circ_CSNK1G1
Synonym: hsa_circ_101555
Host Gene: CSNK1G1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues; paired nontumorous tissues; serum

Cell lines:

HepG2; HCCLM3; SK-Hep1; Huh-7; L02; HEK293T; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CDCA3, EIF4A3
Associated microRNA: miR-145-5p
Biological function: promotes proliferation; promotes migration; promotes invasion; promotes tumor growth in vivo
Molecular mechanism: Acts as a competing endogenous RNA (miRNA sponge) for miR-145-5p to upregulate CDCA3; EIF4A3 promotes hsa_circ_101555 biogenesis via binding to flanking sequences of CSNK1G1 pre-mRNA.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
H
M
Validation methods:

Bioinformatics Analysis; Microarray; RT-qPCR; FISH / smFISH; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); RIP (RNA Immunoprecipitation); RNA Pull-Down; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis

Clinical significance:

High hsa_circ_101555 expression in HCC was associated with overall survival; serum hsa_circ_101555 was significantly higher in HCC patients compared to healthy controls; higher in III-IV stage HCC compared to I-II stage patients.

Description:

hsa_circ_101555 is up-regulated in HCC tissues/serum and HCC cell lines and mainly localizes to the cytoplasm. It promotes HCC proliferation, migration, invasion and xenograft growth by acting as a ceRNA that sponges miR-145-5p, thereby relieving repression of CDCA3; EIF4A3 facilitates its biogenesis via CSNK1G1 pre-mRNA binding.

Confidence score:

0.8868

Other information
Title:

Circular RNA hsa_circ_101555 promotes hepatocellular carcinoma cell proliferation and migration by sponging miR-145-5p and regulating CDCA3 expression.

Journal: Cell death & disease
Published: 2021
PubMed ID: 33824281
Study type:

combined biological and clinical study

Data availability: GSE7852; GSE94508; GSE97322; GSE115016; GSE41874; GSE115018; GSE84402
Code availability: -