circRNA basic information
circBase ID: hsa_circ_0016456
Name: -
Synonym: circR-0016456
Host Gene: -
Genomic location(hg19): chr1:214795421-214830752:+
Genomic location(hg38): chr1:214622078-214657409:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

liver tissue
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0016456 is identified as up-regulated in cirrhosis and strongly up-regulated in HCC compared with healthy liver in the sequencing-based differential expression analysis; no mechanistic role is tested.
Confidence score:

0.1768
Other information
Title:

Non-coding RNAs in Various Stages of Liver Disease Leading to Hepatocellular Carcinoma: Differential Expression of miRNAs, piRNAs, lncRNAs, circRNAs, and sno/mt-RNAs.

Journal: Scientific reports
Published: 2018
PubMed ID: 29789629
Study type:

bioinformatics study
Data availability: PRJNA266511; PRJEB11462
Code availability: -