circRNA basic information
circBase ID: hsa_circ_0003892
Name: hsa_circ_LDLR
Synonym: circ_LDLR
Host Gene: LDLR
Genomic location(hg19): chr19:11230767-11238761:+
Genomic location(hg38): chr19:11120091-11128085:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid carcinoma
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tissues; adjacent normal thyroid tissues; tumors (xenograft)

Cell lines:

Nthy-ori3-1; K-1; SW1736; TPC-1; SW579

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LIPH
Associated microRNA: miR-195-5p
Biological function: Promotes PTC cell proliferation, colony formation, migration and invasion; inhibits apoptosis; promotes tumor growth in vivo.
Molecular mechanism: Acts as a miRNA sponge for miR-195-5p to upregulate LIPH (ceRNA-like regulation).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNA-seq; RNase R Treatment; Actinomycin D / DRB Stability Assay; Transfection; Colony Formation Assay; MTT; Western Blot; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; Bioinformatics Analysis; Clinical Sample Validation; In Vivo Animal Model

Clinical significance:

-

Description:

circ_LDLR is upregulated in papillary thyroid carcinoma and functions as an oncogenic circRNA. It promotes malignant phenotypes and tumor growth by sponging miR-195-5p, thereby increasing LIPH expression (circ_LDLR/miR-195-5p/LIPH axis).

Confidence score:

0.7799

Other information
Title:

Circ_LDLR promoted the development of papillary thyroid carcinoma via regulating miR-195-5p/LIPH axis.

Journal: Cancer cell international
Published: 2020
PubMed ID: 32549788
Study type:

combined biological and clinical study

Data availability: GSE93522; GSE73182; GSE54958
Code availability: -