circRNA basic information
circBase ID: hsa_circ_0005630
Name: hsa_circ_RAB11FIP1
Synonym: CircRAB11FIP1
Host Gene: RAB11FIP1
Genomic location(hg19): chr8:37727937-37735069:-
Genomic location(hg38): chr8:37870419-37877551:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005140
MONDO name: ovarian carcinoma
Disease details: epithelial ovarian cancer
Disease DO ID:
4001
Disease MeSH ID:
-
Disease NCIt ID:
C4908
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

EOC tissues; non-carcinoma tissue samples; serum samples

Cell lines:

SKOV3; A2780

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ATG7, ATG14, DSC1, ATG101, FTO, ATG5
Associated microRNA: miR-129 / miR-129-5p
Biological function: Promotes autophagic flux, proliferation, invasion/migration, and metastasis in epithelial ovarian cancer cells.
Molecular mechanism: Acts as a miRNA sponge for miR-129 to regulate ATG7/ATG14; directly binds DSC1 protein to facilitate DSC1-ATG101 interaction; binds FTO mRNA and promotes FTO expression, affecting m6A methylation of ATG5/ATG7 mRNA.
Biological pathway or process:

autophagy (promotes); proliferation (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes); m6A modification (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; FISH / smFISH; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; EdU Staining; Transwell Assay; Western Blot; Co-IP; In Vivo Animal Model

Clinical significance:

May serve as a candidate biomarker/marker for EOC diagnosis and treatment.

Description:

circRAB11FIP1 is upregulated in epithelial ovarian cancer and promotes autophagic flux, enhancing proliferation, invasion/migration and in vivo metastasis. Mechanistically, it sponges miR-129 to increase ATG7/ATG14, binds DSC1 to enhance DSC1-ATG101 interaction, and binds FTO mRNA to elevate FTO and modulate m6A-dependent ATG5/ATG7 expression; it is proposed as a diagnostic/therapeutic biomarker for EOC.

Confidence score:

0.7836

Other information
Title:

CircRAB11FIP1 promoted autophagy flux of ovarian cancer through DSC1 and miR-129.

Journal: Cell death & disease
Published: 2021
PubMed ID: 33637694
Study type:

combined biological and clinical study

Data availability: The data analyzed in this study are included in the manuscript.
Code availability: -