circRNA basic information
circBase ID: hsa_circ_0049271
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr19:10610070-10610756:-
Genomic location(hg38): chr19:10499394-10500080:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; adjacent normal tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: PDGFB, TNFRSF19, CCND2, CTF1, IL11RA, IL7R, MAOA
Associated microRNA: hsa-miR-3127-5p, hsa-miR-1306-5p
Biological function: May act as a tumor suppressor and is associated with cell proliferation-related processes in LUAD.
Molecular mechanism: ceRNA mechanism via sponging miRNAs to regulate downstream mRNAs in a circRNA-miRNA-mRNA network (ENCORI-based).
Biological pathway or process:

proliferation (other); JAK/STAT (other); ceRNA regulation (other)

Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis; Survival Analysis

Clinical significance:

Low hsa_circ_0049271 expression in LUAD; decreased expression was associated with short OS period.

Description:

This study constructed an ENCORI-based ceRNA network in LUAD centered on the down-regulated circRNA hsa_circ_0049271, linking it to hsa-miR-3127-5p/hsa-miR-1306-5p and seven target mRNAs. Genes in this network were enriched in proliferation-related processes and the JAK-STAT pathway, and reduced hsa_circ_0049271 expression was associated with shorter overall survival.

Confidence score:

0.348

Other information
Title:

Construction and comprehensive analysis of a ceRNA network to reveal potential prognostic biomarkers for lung adenocarcinoma.

Journal: BMC cancer
Published: 2021
PubMed ID: 34301211
Study type:

bioinformatics study

Data availability: GSE101684; GSE101586; GSE29249; TCGA-LUAD
Code availability: -