circRNA basic information
circBase ID: hsa_circ_0023919
Name: hsa_circ_PICALM
Synonym: -
Host Gene: PICALM
Genomic location(hg19): chr11:85707868-85714494:-
Genomic location(hg38): chr11:85996825-86003451:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissue samples

Cell lines:

T24; UM-UC-3; J82; RT-4; SV-HUC-1; HEK-293 T; EJ

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: DHX9, STEAP4, FAK, Ago2
Associated microRNA: miR-1265
Biological function: inhibits bladder cancer cell migration, invasion, wound healing and lymphatic metastasis; inhibits EMT
Molecular mechanism: circPICALM acts as a miR-1265 sponge (ceRNA) to regulate STEAP4, thereby affecting FAK autophosphorylation at Y397 and EMT; DHX9 negatively regulates circPICALM levels
Biological pathway or process:

migration (inhibits); invasion (inhibits); metastasis (inhibits); EMT (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; Transwell Assay; Wound Healing Assay; Western Blot; Co-IP; In Vivo Animal Model; H&E Staining; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

low circPICALM expression was related to advanced T stage, high grade, lymph node positivity and poor overall survival; circPICALM expression was an independent prognostic factor

Description:

circPICALM is downregulated in bladder cancer and functions as a metastasis suppressor. It mainly localizes in the cytoplasm and sponges miR-1265 to de-repress STEAP4, thereby reducing FAK Y397 phosphorylation and inhibiting EMT and metastatic behaviors. Low circPICALM is associated with advanced clinicopathologic features and worse overall survival.

Confidence score:

0.895

Other information
Title:

Circular RNA circPICALM sponges miR-1265 to inhibit bladder cancer metastasis and influence FAK phosphorylation.

Journal: EBioMedicine
Published: 2019
PubMed ID: 31648990
Study type:

combined biological and clinical study

Data availability: GSE97239; TCGA; https://doi.org/10.1016/j.ebiom.2019.08.074
Code availability: -