circRNA basic information
circBase ID: hsa_circ_0123629
Name: hsa_circ_ARPP21
Synonym: circARPP21
Host Gene: ARPP21
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; para-tumor normal tissues

Cell lines:

Huh7; Hep3B; HepG2; SMMC-7721; MHCC97H; HCCLM3; LO2; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: LIFR
Associated microRNA: miR-543
Biological function: Suppresses HCC cell proliferation, invasion, and migration (tumor suppressor).
Molecular mechanism: Acts as a miRNA sponge for miR-543 to indirectly upregulate LIFR (ceRNA mechanism).
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Sanger Sequencing; Luciferase Reporter Assay; RNA Pull-Down; FISH / smFISH; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis; Western Blot

Clinical significance:

Reduced expression of circARPP21 in HCC patients is correlated with larger tumor size, higher tug-lymph node metastasis (TNM) stage, and poor prognosis as indicated by elevated levels of alpha-fetoprotein (AFP).

Description:

circARPP21 (hsa_circ_0123629) is downregulated in hepatocellular carcinoma and functions as a tumor suppressor by sponging miR-543, thereby relieving miR-543-mediated repression of LIFR. Increasing circARPP21 inhibits HCC cell proliferation, migration, and invasion, and low circARPP21 expression is associated with worse clinical features and prognosis.

Confidence score:

0.8658

Other information
Title:

Circular RNA circARPP21 Acts as a Sponge of miR-543 to Suppress Hepatocellular Carcinoma by Regulating LIFR.

Journal: OncoTargets and therapy
Published: 2021
PubMed ID: 33584097
Study type:

combined biological and clinical study

Data availability: -
Code availability: -