circRNA basic information
circBase ID: hsa_circ_0001360
Name: hsa_circ_PHC3
Synonym: circRNA‐0001360
Host Gene: PHC3
Genomic location(hg19): chr3:169863210-169867032:-
Genomic location(hg38): chr3:170145422-170149244:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002529
MONDO name: skin squamous cell carcinoma
Disease details: cutaneous squamous cell carcinoma
Disease DO ID:
3151
Disease MeSH ID:
-
Disease NCIt ID:
C4819
Disease ICD11 ID:
1448983042
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cSCC tissues; adjacent nontumorous tissues

Cell lines:

SCL‐1; HSC‐1; A2058; A431; TE353.sk; TE354.T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: 726 mRNAs
Associated microRNA: hsa‐miR‐8055, hsa‐miR‐8063, hsa‐miR‐4494, hsa‐miR‐888‐3p, hsa‐miR‐6824‐5p
Biological function: inhibits proliferation, colony formation, migration and invasion; promotes apoptosis
Molecular mechanism: Predicted ceRNA mechanism via sponging miRNAs and regulating downstream mRNAs; implicated in PI3K-Akt signaling pathway
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); migration (inhibits); invasion (inhibits); PI3K/AKT (other); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; RNA-seq; RNase R Treatment; Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Colony Formation Assay; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

hsa_circ_0001360 may have potential as a biomarker for cSCC

Description:

hsa_circ_0001360 is significantly down-regulated in cSCC tissues. Functionally, it acts as a tumor-suppressive circRNA in SCL-1 cells by inhibiting proliferation/colony formation, migration and invasion and by promoting apoptosis, with a predicted ceRNA network involving five miRNAs and many downstream mRNAs (potentially related to PI3K/AKT signaling).

Confidence score:

0.7507

Other information
Title:

Circular RNA profiles and the potential involvement of down-expression of hsa_circ_0001360 in cutaneous squamous cell carcinogenesis.

Journal: FEBS open bio
Published: 2021
PubMed ID: 33569895
Study type:

combined biological and clinical study

Data availability: PRJNA701842
Code availability: -