circRNA basic information
circBase ID: -
Name: hsa_circ_SMARCA5
Synonym: circSMARCA5
Host Gene: SMARCA5
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma multiforme
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

GBM tumor biopsies; unaffected brain parenchyma

Cell lines:

U87MG; CAS-1; IM-HBMEC

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: SRSF1, DHX9, VEGFA
Associated microRNA: -
Biological function: Tumor-suppressive effects in GBM, including decreasing GBM cell migration and reducing pro-angiogenic potential; its reduced binding to SRSF1 increases migration and angiogenesis-related outputs (VEGFA splicing ratio and secreted VEGFA mRNA).
Molecular mechanism: circSMARCA5 acts as an RBP decoy binding SRSF1 via GAUGAA motif-containing sites, thereby regulating SRSF1-mediated splicing outcomes (VEGFA isoforms) and downstream migration/angiogenesis phenotypes; DHX9 is proposed as a negative regulator of circSMARCA5 expression.
Biological pathway or process:

migration (inhibits); angiogenesis (inhibits); other pathway/process (other)

Detected method:
Q
B
Validation methods:

Northern Blot; RT-qPCR; Clinical Sample Validation; Cohort Study; Bioinformatics Analysis; RIP (RNA Immunoprecipitation); Transfection; Transwell Assay; Tube Formation Assay; Survival Analysis

Clinical significance:

circSMARCA5 expression positively correlates with overall patient survival and progression free survival in GBM.

Description:

circSMARCA5 is down-regulated in GBM and functions as a tumor-suppressive RBP decoy for SRSF1. Disrupting its GAUGAA motif weakens SRSF1 binding and increases GBM cell migration and pro-angiogenic activity, associated with altered VEGFA isoform balance and increased extracellular VEGFA mRNA.

Confidence score:

0.7513

Other information
Title:

The GAUGAA Motif Is Responsible for the Binding between circSMARCA5 and SRSF1 and Related Downstream Effects on Glioblastoma Multiforme Cell Migration and Angiogenic Potential.

Journal: International journal of molecular sciences
Published: 2021
PubMed ID: 33562358
Study type:

combined biological and clinical study

Data availability: -
Code availability: -