circRNA basic information
circBase ID: -
Name: hsa_circ_SYNJ1
Synonym: circSNYJ1
Host Gene: SYNJ1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: Non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissue samples; paired adjacent non-tumor tissue samples; cancer tissue; adjacent normal tissues

Cell lines:

SPCA1; A549; H1299; H1229; CALU3; 16HBE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCND1, AGO2
Associated microRNA: miR-142-5p
Biological function: Promotes NSCLC cell proliferation, colony formation, migration, tumorigenicity and metastasis, while inhibiting apoptosis; silencing circSYNJ1 causes cell cycle arrest in the G2 phase.
Molecular mechanism: circSYNJ1 acts as a competing endogenous RNA that sponges miR-142-5p to regulate CCND1 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); metastasis (promotes); apoptosis (inhibits); cell cycle (promotes)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNase R Treatment; circRNA-seq; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; Survival Analysis; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Western Blot; In Vivo Animal Model

Clinical significance:

Higher circSYNJ1 expression is correlated with poor prognosis, advanced staging, metastasis, and reduced survival; circSYNJ1 is proposed as a potential diagnostic and prognostic biomarker for NSCLC.

Description:

circSYNJ1/circSNYJ1 is up-regulated in NSCLC tissues and cell lines and high expression is associated with poor prognosis. It promotes NSCLC proliferation, colony formation, migration, tumorigenicity and metastasis while suppressing apoptosis, mainly through a ceRNA mechanism in which it sponges miR-142-5p to regulate CCND1.

Confidence score:

0.8571

Other information
Title:

Functional analysis of circSNYJ1/miR-142-5p/CCND1 regulatory axis in non-small cell lung cancer.

Journal: American journal of cancer research
Published: 2024
PubMed ID: 39113852
Study type:

combined biological and clinical study

Data availability: GSE112214; GSE101586
Code availability: -