circRNA basic information
circBase ID: -
Name: hsa_circ_STK39
Synonym: circ_30029
Host Gene: STK39
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0008315
MONDO name: prostate cancer
Disease details: prostate cancer
Disease DO ID:
 10283
Disease MeSH ID:
 D011471
Disease NCIt ID:
 C7378
Disease ICD11 ID:
 -
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor samples
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UN
Associated gene: -
Associated microRNA: -
Biological function: Associated with biochemical recurrence prediction as part of an eight-circRNA risk-score signature; higher expression is correlated with less biochemical recurrence (protective coefficient).
Molecular mechanism: not specified
Biological pathway or process:

immune regulation (other)
Detected method:
S
Validation methods:

circRNA-seq; Bioinformatics Analysis; Cohort Study; Survival Analysis; ROC Analysis
Clinical significance:

Part of an eight-circRNA prognostic model to predict biochemical recurrence in prostate cancer; high expression is correlated with less biochemical recurrence.
Description:

circ_30029 is one component of an eight-circRNA signature that predicts biochemical recurrence in prostate cancer. In the model, its negative coefficient indicates that higher circ_30029 expression is associated with reduced biochemical recurrence risk.
Confidence score:

0.5504
Other information
Title:

An Eight-CircRNA Assessment Model for Predicting Biochemical Recurrence in Prostate Cancer.

Journal: Frontiers in cell and developmental biology
Published: 2020
PubMed ID: 33363156
Study type:

combined biological and clinical study
Data availability: GSE113124
Code availability: -