circRNA basic information
circBase ID: hsa_circ_0036200
Name: hsa_circ_PKM2
Synonym: circPKM2
Host Gene: PKM2
Genomic location(hg19): chr15:72509749-72511451:-
Genomic location(hg38): chr15:72217408-72219110:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent normal tissues

Cell lines:

NCI-H1299; A549; BEAS-2B; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MTDH
Associated microRNA: miR-1298-5p
Biological function: Promotes NSCLC cell proliferation, migration, invasion and tube formation (angiogenesis) and inhibits apoptosis; promotes xenograft tumor growth.
Molecular mechanism: Acts as a ceRNA sponge for miR-1298-5p to upregulate MTDH expression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Tube Formation Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

circPKM2 is upregulated in NSCLC tissues and cell lines and mainly localizes to the cytoplasm. It promotes NSCLC malignant phenotypes and xenograft growth by sponging miR-1298-5p, thereby increasing MTDH expression.

Confidence score:

0.8443

Other information
Title:

CircPKM2 aggravates the progression of non-small cell lung cancer by regulating MTDH via miR-1298-5p.

Journal: Thoracic cancer
Published: 2023
PubMed ID: 37675591
Study type:

combined biological and clinical study

Data availability: GSE101586; GSE112214
Code availability: -