circRNA basic information
circBase ID: hsa_circ_0007158
Name: hsa_circ_FAM169A
Synonym: circ-FAM169A
Host Gene: FAM169A
Genomic location(hg19): chr5:74109664-74137504:-
Genomic location(hg38): chr5:74813839-74841679:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0011385
MONDO name: intervertebral disk degenerative disorder
Disease details: intervertebral disc degeneration
Disease DO ID:
90
Disease MeSH ID:
D055959
Disease NCIt ID:
C26983
Disease ICD11 ID:
-
Disease OMIM ID:
603932
Species: Human
Species details: Homo sapiens
Tissue specimen:

nucleus pulposus (NP) tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Sox9
Associated microRNA: miR-583
Biological function: regulates extracellular matrix metabolism and cell apoptosis in NPCs (via miR-583/Sox9)
Molecular mechanism: ceRNA mechanism: circ-FAM169A sponges miR-583, affecting Sox9 expression
Biological pathway or process:

apoptosis (other); ceRNA regulation (promotes); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Western Blot; Transfection; Clinical Sample Validation

Clinical significance:

may provide novel diagnostic biomarkers and develop effective treatment strategy of IDD diseases

Description:

circ-FAM169A is up-regulated in degenerative human NP tissues in IDD. It localizes to the cytoplasm and acts as a ceRNA that directly sponges miR-583, thereby influencing the miR-583 target Sox9 and potentially modulating ECM metabolism and apoptosis in NPCs.

Confidence score:

0.659

Other information
Title:

Identification of circ-FAM169A sponges miR-583 involved in the regulation of intervertebral disc degeneration.

Journal: Journal of orthopaedic translation
Published: 2021
PubMed ID: 33437631
Study type:

combined biological and clinical study

Data availability: GSE67566; https://doi.org/10.1016/j.jot.2020.07.007
Code availability: -