circRNA basic information
circBase ID: -
Name: hsa_circ_GFRA1
Synonym: CircRNA GFRA1
Host Gene: GFRA1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal adjacent tissues

Cell lines:

SMMC-7721; HepG2; PLC; SK-Hep1; Huh7; HCCLM3; Hep3B; LO2

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: NAP1L3
Associated microRNA: miR-498
Biological function: promotes proliferation and invasion; promotes tumor growth and progression
Molecular mechanism: circGFRA1 acts as a miRNA sponge for miR-498 to up-regulate NAP1L3
Biological pathway or process:

proliferation (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

divergent primers PCR; RT-qPCR; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; BrdU; Colony Formation Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model

Clinical significance:

High circGFRA1 expression was markedly related to tumor size, intrahepatic metastasis, extrahepatic metastasis, BCLC stage and TNM stage as well as poor overall survival.

Description:

circGFRA1 is up-regulated in HCC tissues and cell lines and is associated with advanced stage and poor overall survival. Functionally, circGFRA1 promotes HCC proliferation, invasion, and xenograft tumor growth by sponging miR-498 to increase NAP1L3 expression.

Confidence score:

0.7891

Other information
Title:

CircRNA GFRA1 promotes hepatocellular carcinoma progression by modulating the miR-498/NAP1L3 axis.

Journal: Scientific reports
Published: 2021
PubMed ID: 33431945
Study type:

combined biological and clinical study

Data availability: Supplementary material available at 10.1038/s41598-020-79321-y
Code availability: -