circRNA basic information
circBase ID: hsa_circ_0136666
Name: hsa_circ_PRKDC
Synonym: circ-PRKDC
Host Gene: PRKDC
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent non-tumor tissues; xenograft tumors

Cell lines:

SW480; HCT116; FHC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: DDR1
Associated microRNA: miR-198
Biological function: promotes proliferation, migration and invasion; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ-PRKDC sponges miR-198 to upregulate DDR1
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

circ-PRKDC expression was related to TNM stage

Description:

circ-PRKDC (hsa_circ_0136666) is up-regulated in colorectal cancer and promotes malignant phenotypes (proliferation, migration, invasion) while inhibiting apoptosis and facilitating tumor growth. Mechanistically, it acts as a ceRNA by sponging miR-198, thereby increasing DDR1 expression.

Confidence score:

0.7595

Other information
Title:

Circ-PRKDC Facilitates the Progression of Colorectal Cancer Through miR-198/DDR1 Regulatory Axis.

Journal: Cancer management and research
Published: 2020
PubMed ID: 33364834
Study type:

combined biological and clinical study

Data availability: -
Code availability: -