circRNA basic information
circBase ID: -
Name: hsa_circ_FAT1
Synonym: circFAT1
Host Gene: FAT1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal tissues

Cell lines:

Huh7; Hep3B; 293T; Lo-2

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: REEP3, AGO2
Associated microRNA: miR-30a-5p
Biological function: promotes proliferation, invasion, EMT and tumorigenesis in hepatocellular carcinoma
Molecular mechanism: circFAT1 acts as a miRNA sponge for miR-30a-5p to upregulate REEP3 (ceRNA mechanism)
Biological pathway or process:

proliferation (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; Western Blot; ELISA; In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

circFAT1 level is positively correlated with TNM stage and tumour size; potential diagnostic and therapeutic biomarker/target in HCC

Description:

circFAT1 is up-regulated in hepatocellular carcinoma tissues and cell lines and mainly localizes to the cytoplasm. It promotes HCC proliferation, invasion, EMT and xenograft tumor growth by acting as a ceRNA that sponges miR-30a-5p, thereby increasing REEP3 expression.

Confidence score:

0.7631

Other information
Title:

CircFAT1 promotes hepatocellular carcinoma progression via miR-30a-5p/REEP3 pathway.

Journal: Journal of cellular and molecular medicine
Published: 2020
PubMed ID: 33179443
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -