circRNA basic information
circBase ID: hsa_circ_0000338
Name: hsa_circ_FCHSD2
Synonym: -
Host Gene: FCHSD2
Genomic location(hg19): chr11:72632872-72726930:-
Genomic location(hg38): chr11:72921827-73015885:-
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum exosomes; cell line exosomes

Cell lines:

HCT116

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: FCHSD2
Associated microRNA: -
Biological function: Modulates chemoresistance; knockdown increases viability under drug treatment (reduced sensitivity) and authors propose dual roles (tumor-suppressive in cells vs oncogenic in exosomes).
Molecular mechanism: Not experimentally resolved; bioinformatics prediction of MREs/targets for upregulated circRNAs; functional effect tested by siRNA knockdown.
Biological pathway or process:

drug resistance (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; Bioinformatics Analysis; Transfection; MTT; Cell Cycle Assay

Clinical significance:

Differentially upregulated hsa_circ_0000338 in exosomes could serve as a potential biomarker for early prediction of chemoresistance in CRC.

Description:

hsa_circ_0000338 (circ_0000338), derived from FCHSD2, is upregulated in exosomes from FOLFOX-resistant HCT116-R CRC cells. siRNA knockdown in resistant cells increased drug-treated viability, and the authors propose a dual role with tumor-suppressive properties in cells but oncogenic effects when transferred via exosomes; it is suggested as a potential biomarker of chemoresistance.

Confidence score:

0.7399

Other information
Title:

Extracellular Vesicle-derived circular RNAs confers chemoresistance in Colorectal cancer.

Journal: Scientific reports
Published: 2019
PubMed ID: 31712601
Study type:

combined biological and clinical study

Data availability: Supplementary information is available for this paper at 10.1038/s41598-019-53063-y.
Code availability: -