circRNA basic information
circBase ID: hsa_circ_0087293
Name: hsa_circ_TLE4
Synonym: circRNA-SORE
Host Gene: TLE4
Genomic location(hg19): chr9:82267504-82268990:+
Genomic location(hg38): chr9:79652589-79654075:+
Subcellular localization: cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

liver tissue; blood

Cell lines:

HepG2-SR; LM3-SR; SKhep1-SR; HepG2-P; LM3-P; SKhep1-P; 293T

In vivo animal model:

cell line-derived xenograft / patient-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YBX1, PRP19, FMRP, IMP1, IMP3
Associated microRNA: -
Biological function: maintains and spreads sorafenib resistance; inhibits sorafenib-induced apoptosis; increases cell viability and colony formation under sorafenib; promotes tumor drug resistance in vivo
Molecular mechanism: binds YBX1 in the cytoplasm, prevents YBX1 nuclear translocation and PRP19-mediated ubiquitination/degradation, stabilizing YBX1; exosomal transfer transmits resistance
Biological pathway or process:

apoptosis (inhibits); drug resistance (promotes); proliferation (promotes); ceRNA regulation (not specified)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Transfection; Western Blot; Luciferase Reporter Assay; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; TUNEL; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Lower circRNA-SORE expression was associated with better recurrence-free survival (RFS) in sorafenib-treated HCC patients; potential biomarker to predict sorafenib efficacy; exosomal circRNA-SORE level in blood associated with response rate to sorafenib

Description:

circRNA-SORE (circRNA_104797/circ_0087293) is up-regulated in sorafenib-resistant HCC cells and promotes sorafenib resistance by inhibiting sorafenib-induced apoptosis. Mechanistically, it binds YBX1 in the cytoplasm to prevent PRP19-mediated ubiquitination and degradation of YBX1, and it can be transported via exosomes to spread resistance among HCC cells; high circRNA-SORE predicts worse recurrence-free survival in sorafenib-treated patients.

Confidence score:

0.8792

Other information
Title:

CircRNA-SORE mediates sorafenib resistance in hepatocellular carcinoma by stabilizing YBX1.

Journal: Signal transduction and targeted therapy
Published: 2020
PubMed ID: 33361760
Study type:

combined biological and clinical study

Data availability: -
Code availability: -