circRNA basic information
circBase ID: -
Name: hsa_circ_RPPH1
Synonym: hsa_circRNA_002144
Host Gene: RPPH1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent non-tumorous tissues; plasma

Cell lines:

T84; LoVo; SNU-175; CL-34; FHC; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LARP1, mTOR
Associated microRNA: miR-615-5p
Biological function: promotes cell viability, proliferation, migration and invasion; promotes tumor growth and metastasis; inhibits apoptosis; promotes EMT
Molecular mechanism: ceRNA (miRNA sponge) mechanism: hsa_circ_002144 binds miR-615-5p, reduces miR-615-5p, leading to increased LARP1 and mTOR expression to promote CRC progression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); EMT (promotes); mTOR (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNase R Treatment; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; Western Blot; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); RNA-seq

Clinical significance:

High hsa_circ_002144 expression was closely associated with shorter overall survival and metastatic clinicopathological features in CRC patients; not an independent prognostic biomarker by multivariate Cox regression.

Description:

hsa_circ_002144 is up-regulated in colorectal cancer tissues and cell lines and is associated with shorter overall survival. Functionally, it promotes CRC growth, metastasis and EMT while inhibiting apoptosis, mainly by sponging miR-615-5p to increase LARP1 and mTOR expression.

Confidence score:

0.8192

Other information
Title:

Hsa_circRNA_002144 promotes growth and metastasis of colorectal cancer through regulating miR-615-5p/LARP1/mTOR pathway.

Journal: Carcinogenesis
Published: 2021
PubMed ID: 33347535
Study type:

combined biological and clinical study

Data availability: GSE126095
Code availability: -