circRNA basic information
circBase ID: hsa_circ_0065173
Name: hsa_circ_SETD2
Synonym: circ_SETD2
Host Gene: SETD2
Genomic location(hg19): chr3:47155365-47168153:-
Genomic location(hg38): chr3:47113875-47126663:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: Breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent normal tissues; tumor tissues

Cell lines:

MCF-7; MDA-MB-231; MCF-10A

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: SCUBE2
Associated microRNA: miR-155-5p
Biological function: Represses breast cancer progression by arresting cell cycle, inhibiting proliferation/migration/invasion, and promoting apoptosis; suppresses tumor growth in vivo.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-155-5p to upregulate SCUBE2.
Biological pathway or process:

cell cycle (inhibits); proliferation (inhibits); apoptosis (promotes); migration (inhibits); invasion (inhibits); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Transfection; Luciferase Reporter Assay; MTT; Transwell Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Western Blot; Clinical Sample Validation; In Vivo Animal Model

Clinical significance:

-

Description:

circ_SETD2 is down-regulated in breast cancer and functions as a tumor suppressor. It sponges miR-155-5p to increase SCUBE2, thereby inhibiting proliferation/migration/invasion, arresting the cell cycle, promoting apoptosis, and suppressing xenograft tumor growth.

Confidence score:

0.7799

Other information
Title:

Circular RNA circ_SETD2 represses breast cancer progression via modulating the miR-155-5p/SCUBE2 axis.

Journal: Open medicine (Warsaw, Poland)
Published: 2020
PubMed ID: 33336052
Study type:

combined biological and clinical study

Data availability: GSE101124; GSE62931
Code availability: -