circRNA basic information
circBase ID: hsa_circ_0004018
Name: hsa_circ_EPHB4
Synonym: circ_EPHB4
Host Gene: EPHB4
Genomic location(hg19): chr17:1703150-1704318:-
Genomic location(hg38): chr17:1799856-1801024:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: glioma
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioma tissues; adjacent tissues; subcutaneous tumor tissues; lung tissues

Cell lines:

U251; A172; SHG44; LN229; U373; HEB

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YTHDF3, Wnt3, Wnt3 mRNA
Associated microRNA: -
Biological function: Promotes glioma cell migration, invasion, EMT, tumorigenicity, and lung metastasis.
Molecular mechanism: circ_EPHB4 promotes glioma progression by upregulating Wnt3 expression and synergizing with the m6A reader YTHDF3, which stabilizes Wnt3 mRNA in an m6A-dependent manner.
Biological pathway or process:

migration (promotes); invasion (promotes); EMT (promotes); metastasis (promotes); mRNA stability (promotes); m6A modification (other); other pathway/process (promotes)

Detected method:
Q
S
M
Validation methods:

RT-qPCR; RNA-seq; Microarray; Clinical Sample Validation; Transfection; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; RNA Pull-Down; RIP (RNA Immunoprecipitation); Actinomycin D / DRB Stability Assay; Bioinformatics Analysis

Clinical significance:

circ_EPHB4 is suggested as a valuable prognostic marker and a potential therapeutic target in glioma.

Description:

circ_EPHB4 is up-regulated in glioma tissues and glioma cell lines. It promotes glioma migration, invasion, EMT, tumor growth, and lung metastasis, at least partly by enhancing Wnt3 expression and cooperating with the m6A reader YTHDF3 to regulate Wnt3 mRNA stability. The study suggests the circ_EPHB4-YTHDF3-Wnt3 axis as a potential therapeutic target in glioma.

Confidence score:

0.8244

Other information
Title:

[circ_EPHB4 synergizes with YTHDF3 to promote glioma progression via m6A-dependent stabilization of Wnt3].

Journal: Nan fang yi ke da xue xue bao = Journal of Southern Medical University
Published: 2025
PubMed ID: 41311073
Study type:

combined biological and clinical study

Data availability: StarBase database; TCGA samples
Code availability: -