circRNA basic information
circBase ID: hsa_circ_0008003
Name: -
Synonym: circ‐0008003
Host Gene: -
Genomic location(hg19): chr4:16587544-16900052:-
Genomic location(hg38): chr4:16585921-16898429:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non‐small cell lung carcinoma
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; para-cancerous tissues / para‐carcinoma tissues; non‐tumour tissues

Cell lines:

CAL‐12T; HCC827; A549; H460; H1299; 16HBE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ZNF281, AGO2
Associated microRNA: miR‐488
Biological function: promotes NSCLC cell proliferation and invasion and promotes tumor growth in vivo
Molecular mechanism: circ‐0008003 acts as a ceRNA by sponging miR‐488 to de-repress ZNF281 in NSCLC
Biological pathway or process:

proliferation (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

high circ‐0008003 level was associated with TNM stage and lymphatic metastasis, and NSCLC patients with high circ‐0008003 level had poor prognosis

Description:

hsa_circ_0008003 (circ-0008003) is up-regulated in NSCLC tissues and cell lines and promotes proliferation, invasion, and xenograft tumor growth. Mechanistically, it acts as a cytoplasmic ceRNA that sponges miR-488 to increase ZNF281 expression. High circ-0008003 level is associated with advanced TNM stage/lymphatic metastasis and predicts poor survival.

Confidence score:

0.8581

Other information
Title:

Circular RNA hsa_circ_0008003 facilitates tumorigenesis and development of non-small cell lung carcinoma via modulating miR-488/ZNF281 axis.

Journal: Journal of cellular and molecular medicine
Published: 2022
PubMed ID: 33320427
Study type:

combined biological and clinical study

Data availability: GSE112214; The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -