circRNA basic information
circBase ID: hsa_circ_0001955
Name: hsa_circ_CSNK1G1
Synonym: circ_0001955
Host Gene: CSNK1G1
Genomic location(hg19): chr15:64495280-64508912:-
Genomic location(hg38): chr15:64203081-64216713:-
Subcellular localization: cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancer tissue; normal paracancerous tissue; normal adjacent tissues

Cell lines:

MCF7; MDA-MB-231; MCF-10A; MCF7/PTX; MDA-MB-231/PTX

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PGK1, Ago2
Associated microRNA: miR-708-5p
Biological function: promotes proliferation; promotes glycolysis; enhances paclitaxel (PTX) IC50; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: circ_0001955 functions as a ceRNA sponge for miR-708-5p, thereby upregulating PGK1 and promoting glycolysis and malignant phenotypes in breast cancer; circ_0001955 is packaged into exosomes and transferred between cells.
Biological pathway or process:

proliferation (promotes); glycolysis (promotes); apoptosis (inhibits); drug resistance (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; divergent primers PCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; EdU; Colony Formation Assay; MTT; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; Survival Analysis

Clinical significance:

High circ_0001955 level is associated with poorer overall survival in breast cancer patients.

Description:

circ_0001955 is up-regulated in breast cancer tissues/cells and is enriched in exosomes. It promotes proliferation and tumor growth, enhances paclitaxel resistance (higher IC50), and stimulates glycolysis by sponging miR-708-5p to upregulate PGK1.

Confidence score:

0.8571

Other information
Title:

Exosome-transported circ_0001955 as a potent driver of breast cancer by regulating the miR-708-5p/PGK1 axis.

Journal: Thoracic cancer
Published: 2024
PubMed ID: 39469816
Study type:

combined biological and clinical study

Data availability: GSE101123
Code availability: -