circRNA basic information
circBase ID: hsa_circ_0032462
Name: hsa_circ_SIPA1L1
Synonym: circSIPA1L1
Host Gene: SIPA1L1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissue samples; chondroma tissue samples

Cell lines:

hFOB1.19; 143B; SJSA-1; HOS; MG-63; U2OS; HEK-293; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RAB9A, Ago2, E-cadherin, N-cadherin
Associated microRNA: miR-411-5p
Biological function: Promotes osteosarcoma progression and metastasis; enhances proliferation, migration, invasion and cell viability; inhibits apoptosis (silencing increases apoptosis).
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-411-5p to increase RAB9A expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); EMT (promotes); metastasis (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; divergent primers PCR; Sanger Sequencing; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Potential biomarker for osteosarcoma treatment / early diagnosis.

Description:

circSIPA1L1 is up-regulated in osteosarcoma tissues and cell lines and mainly localizes in the cytoplasm. It promotes osteosarcoma proliferation and metastatic phenotypes by sponging miR-411-5p, thereby increasing RAB9A expression; circSIPA1L1 knockdown suppresses tumor growth in vitro and in a xenograft model.

Confidence score:

0.8748

Other information
Title:

Circular RNA circSIPA1L1 Contributes to Osteosarcoma Progression Through the miR-411-5p/RAB9A Signaling Pathway.

Journal: Frontiers in cell and developmental biology
Published: 2021
PubMed ID: 33968929
Study type:

combined biological and clinical study

Data availability: GSE96964
Code availability: -