circRNA basic information
circBase ID: hsa_circ_0030605
Name: hsa_circ_ABCC4
Synonym: circABCC4
Host Gene: ABCC4
Genomic location(hg19): chr13:95858785-95953687:-
Genomic location(hg38): chr13:95206531-95301433:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0019091
MONDO name: bronchopulmonary dysplasia
Disease details: bronchopulmonary dysplasia
Disease DO ID:
11650
Disease MeSH ID:
D001997
Disease NCIt ID:
C90599
Disease ICD11 ID:
1462855296
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood; lung tissue

Cell lines:

A549; HEK293

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: PLA2G6, Ago2
Associated microRNA: miR-663a
Biological function: promotes BPD progression by enhancing apoptosis and inhibiting proliferation
Molecular mechanism: ceRNA mechanism: circABCC4 sponges miR-663a to increase PLA2G6 expression
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; H&E Staining; TUNEL; IHC (Immunohistochemistry); Clinical Sample Validation

Clinical significance:

circABCC4 expression was increased in peripheral blood of BPD patients and was positively correlated with poor long-term prognosis; potential diagnostic/prognostic biomarker

Description:

circABCC4 is up-regulated in BPD (patient peripheral blood and hyperoxia models) and mainly localizes to the cytoplasm. It promotes BPD progression by acting as a ceRNA that sponges miR-663a, relieving repression of PLA2G6, thereby enhancing apoptosis and inhibiting proliferation.

Confidence score:

0.8289

Other information
Title:

Promotion of Bronchopulmonary Dysplasia Progression Using Circular RNA circabcc4 via Facilitating PLA2G6 Expression by Sequestering miR-663a.

Journal: Frontiers in cell and developmental biology
Published: 2020
PubMed ID: 33195232
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fcell.2020.585541/full#supplementary-material
Code availability: -