circRNA basic information
circBase ID: hsa_circ_0005875
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr3:132337477-132350323:-
Genomic location(hg38): chr3:132618633-132631479:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005005
MONDO name: clear cell renal carcinoma
Disease details: clear cell renal cell carcinoma
Disease DO ID:
4467
Disease MeSH ID:
-
Disease NCIt ID:
C4033
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ccRCC tissues; para-carcinoma tissues / adjacent non-carcinoma tissues / adjacent normal controls

Cell lines:

caki-1; 786-O; 769-p; ACHN; A498; HK-2; 293T / HEK293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: ZEB2
Associated microRNA: hsa-miR-145-5p, hsa-miR-125a-5p, hsa-miR-125b-5p, hsa-miR-199a-3p
Biological function: Promotes ccRCC cell proliferation, migration, and invasion; may promote tumor growth and metastasis.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-145-5p, relieving repression on ZEB2 (predicted/partially supported).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Clinical Sample Validation; Transfection; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; Bioinformatics Analysis

Clinical significance:

hsa_circ_0005875 expression was associated with tumor size, pathological TNM stage, histological differentiation, and lymphatic metastasis; proposed as a potential biomarker of ccRCC.

Description:

In ccRCC, hsa_circ_0005875 is up-regulated in tumor tissues and most renal carcinoma cell lines. Its overexpression promotes proliferation, migration, and invasion, and it may function as a miR-145-5p sponge to modulate the miR-145-5p/ZEB2 axis, suggesting potential biomarker value.

Confidence score:

0.7291

Other information
Title:

Circular RNA microarray expression profile and potential function of circ0005875 in clear cell renal cell carcinoma.

Journal: Journal of Cancer
Published: 2020
PubMed ID: 33193877
Study type:

combined biological and clinical study

Data availability: GSE100186; GSE108735
Code availability: -