circRNA basic information
circBase ID: hsa_circ_0047924
Name: hsa_circ_RTTN
Synonym: -
Host Gene: RTTN
Genomic location(hg19): chr18:67687850-67688053:-
Genomic location(hg38): chr18:70020614-70020817:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0006486
MONDO name: uveal melanoma
Disease details: uveal melanoma
Disease DO ID:
 6039
Disease MeSH ID:
 C536494
Disease NCIt ID:
 C7712
Disease ICD11 ID:
 -
Disease OMIM ID:
 155720
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; normal uvea tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: hsa-miR-204-3p, hsa-miR-22-5p, hsa-miR-338-3p
Biological function: -
Molecular mechanism: Predicted miRNA sponge/ceRNA interactions.
Biological pathway or process:

ceRNA regulation (other)
Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis
Clinical significance:

-
Description:

hsa_circ_0047924 (host gene RTTN) is up-regulated in uveal melanoma and validated by qRT-PCR. The paper predicts its potential miRNA-binding partners (e.g., miR-204-3p/miR-22-5p/miR-338-3p) via bioinformatics without functional wet-lab assays.
Confidence score:

0.4032
Other information
Title:

Novel circular RNA expression profile of uveal melanoma revealed by microarray.

Journal: Chinese journal of cancer research = Chung-kuo yen cheng yen chiu
Published: 2018
PubMed ID: 30700934
Study type:

combined biological and clinical study
Data availability: -
Code availability: -