circRNA basic information
circBase ID: hsa_circ_0028826
Name: hsa_circ_GCN1L1
Synonym: circ_0028826
Host Gene: GCN1L1
Genomic location(hg19): chr12:120600873-120622046:-
Genomic location(hg38): chr12:120163069-120184243:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer / NSCLC
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tumors; matched paracancer samples

Cell lines:

NCI-H1299; A549; SK-MES-1; Calu-3; HBE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IDH2
Associated microRNA: miR-758-3p
Biological function: Promotes NSCLC cell proliferation, migration, and invasion, inhibits apoptosis, and promotes tumor growth in vivo.
Molecular mechanism: Acts as a miRNA sponge for miR-758-3p to derepress/positively regulate IDH2 expression (ceRNA mechanism).
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

-

Description:

Circ_0028826 is upregulated in NSCLC tissues and cell lines, mainly localized in the cytoplasm, and promotes proliferation, migration/invasion and tumor growth while inhibiting apoptosis. Mechanistically, it sponges miR-758-3p to derepress IDH2, forming a circ_0028826/miR-758-3p/IDH2 regulatory axis.

Confidence score:

0.7594

Other information
Title:

Circ_0028826 Promotes Growth and Metastasis of NSCLC via Acting as a Sponge of miR-758-3p to Derepress IDH2 Expression.

Journal: The clinical respiratory journal
Published: 2024
PubMed ID: 39113352
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -