circRNA basic information
circBase ID: hsa_circ_0079593
Name: hsa_circ_IGF2BP3
Synonym: circ_0079593
Host Gene: IGF2BP3
Genomic location(hg19): chr7:23381682-23383472:-
Genomic location(hg38): chr7:23342063-23343853:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: glioma
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue samples; normal brain tissues; xenograft tumors

Cell lines:

HEB; T98G; LN229; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: XBP1
Associated microRNA: miR-324-5p
Biological function: Circ_0079593 promotes glioma cell proliferation, migration, invasion, angiogenesis, glycolysis and tumor growth, and inhibits apoptosis.
Molecular mechanism: Circ_0079593 functions as a miR-324-5p sponge to up-regulate downstream XBP1, thereby facilitating glioma progression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); glycolysis (promotes); apoptosis (inhibits); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Tube Formation Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circ_0079593 might be a promising therapeutic target for glioma

Description:

circ_0079593 is up-regulated in glioma tissues and cell lines and is mainly cytoplasmic. It promotes glioma proliferation, migration, invasion, angiogenesis, glycolysis and in vivo tumor growth while suppressing apoptosis. Mechanistically, circ_0079593 acts as a ceRNA for miR-324-5p to increase XBP1 expression, forming the circ_0079593/miR-324-5p/XBP1 axis and suggesting therapeutic potential in glioma.

Confidence score:

0.8175

Other information
Title:

Circular RNA circ_0079593 facilitates glioma development via modulating miR-324-5p/XBP1 axis.

Journal: Metabolic brain disease
Published: 2022
PubMed ID: 35793013
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request; supplementary material available at https://doi.org/10.1007/s11011-022-01040-2
Code availability: -