circRNA basic information
circBase ID: hsa_circ_0064286
Name: -
Synonym: Circ_0064286
Host Gene: -
Genomic location(hg19): chr3:11340159-11402258:+
Genomic location(hg38): chr3:11298685-11360784:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: Hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: MAPK14, EIF4AIII
Associated microRNA: miR-421
Biological function: May inhibit tumorigenesis of HCC (tumor suppressor role) via miRNA sponging; proposed interaction with EIF4AIII may relate to its downregulation.
Molecular mechanism: Proposed ceRNA mechanism: hsa_circ_0064286 sponges miR-421 to relieve miR-421-mediated suppression of MAPK14; potential binding by RBP EIF4AIII.
Biological pathway or process:

ceRNA regulation (other); apoptosis (other); cell cycle (other); proliferation (other); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis

Clinical significance:

Potential diagnostic biomarker for HCC in serum; ROC AUC 0.971 with sensitivity 88.3% and specificity 96%.

Description:

In serum from Egyptian HCC patients, hsa_circ_0064286 is significantly down-regulated and shows strong diagnostic performance by ROC analysis. Mechanistically, the paper proposes a ceRNA axis in which hsa_circ_0064286 sponges miR-421 to affect MAPK14, and also suggests potential interaction with the RBP EIF4AIII.

Confidence score:

0.4187

Other information
Title:

Circular RNAs 0064286 and 0000475: Potential Diagnostic Biomarkers in Hepatocellular Carcinoma.

Journal: Asian Pacific journal of cancer prevention : APJCP
Published: 2021
PubMed ID: 34582677
Study type:

clinical study

Data availability: The clinical and demographic data of all patients are available upon request.
Code availability: -