circRNA basic information
circBase ID: hsa_circ_0062682
Name: hsa_circ_TPST2
Synonym: -
Host Gene: TPST2
Genomic location(hg19): chr22:26936754-26937684:-
Genomic location(hg38): chr22:26540788-26541718:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent non-tumorous tissues (NCT)

Cell lines:

HCT8; DLD1; HCT116; HT29; NCM460; CCC-HIE-2; HEK-293T / 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PHGDH, TPST2
Associated microRNA: miR-940
Biological function: promotes CRC cell proliferation and tumor growth; promotes serine metabolism; increases NADPH and GSH levels and reduces ROS levels under stress conditions
Molecular mechanism: ceRNA mechanism: circ_0062682 sponges miR-940 to upregulate PHGDH, enhancing serine biosynthesis and supporting tumor growth
Biological pathway or process:

proliferation (promotes); serine metabolism (promotes); oxidative phosphorylation (not specified)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; EdU Staining; IF (Immunofluorescence); Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); Flow Cytometry(Non-apoptosis/cycle); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis; Survival Analysis; ROC Analysis

Clinical significance:

Increased expression of circ_0062682 in CRC notably correlated with a poor prognosis and advanced tumor stage; circ_0062682 expression could differentiate CRC tissues from normal tissues

Description:

In colorectal cancer, circ_0062682 is upregulated and promotes tumor growth by enhancing serine biosynthesis. It mainly functions in the cytoplasm as a ceRNA that sponges miR-940, thereby releasing PHGDH expression and increasing serine-related metabolic outputs (e.g., NADPH/GSH) that support proliferation and survival under stress.

Confidence score:

0.8673

Other information
Title:

Hsa_circ_0062682 Promotes Serine Metabolism and Tumor Growth in Colorectal Cancer by Regulating the miR-940/PHGDH Axis.

Journal: Frontiers in cell and developmental biology
Published: 2021
PubMed ID: 34957102
Study type:

combined biological and clinical study

Data availability: GSE126094; GSE131969; GSE164803; GSE101684; GSE92675; GSE101123; GSE115513
Code availability: -