circRNA basic information
circBase ID: hsa_circ_0003998
Name: -
Synonym: circ_0003998
Host Gene: -
Genomic location(hg19): chr20:47570092-47580435:+
Genomic location(hg38): chr20:48953555-48963898:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary HCC tissues; adjacent normal tissues

Cell lines:

Hep3B; Huh7; HCCLM3; THLE-2; Huh7/DOX; HCCLM3/DOX

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: EIF5A2
Associated microRNA: miR-218-5p
Biological function: promotes doxorubicin resistance, viability, migration, invasion and EMT in HCC cells; circ_0003998 knockdown sensitizes HCC cells to DOX and enhances DOX cytotoxicity in vivo
Molecular mechanism: ceRNA mechanism: circ_0003998 sponges miR-218-5p to regulate EIF5A2 expression, thereby promoting DOX resistance
Biological pathway or process:

chemoresistance (promotes); EMT (promotes); migration (promotes); invasion (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

high circ_0003998 expression is associated with DOX resistance and may indicate poor response to DOX

Description:

circ_0003998 is up-regulated in HCC, particularly in DOX-resistant tissues/cells, and promotes DOX resistance along with migration, invasion and EMT. Mechanistically, it acts as a ceRNA that sponges miR-218-5p to increase EIF5A2 expression, and its knockdown sensitizes HCC cells to DOX in vitro and in xenograft models.

Confidence score:

0.7177

Other information
Title:

Circ_0003998 enhances doxorubicin resistance in hepatocellular carcinoma by regulating miR-218-5p/EIF5A2 pathway.

Journal: Diagnostic pathology
Published: 2020
PubMed ID: 33308276
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -