circRNA basic information
circBase ID: -
Name: hsa_circ_CDYL
Synonym: circCDYL
Host Gene: CDYL
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumors

Cell lines:

FL3; T24; HCV29

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: prognostic biomarker for lower risk of progression
Molecular mechanism: Not specified (no SCEs or conserved miRNA binding sites reported for circCDYL in this study).
Biological pathway or process:

not specified

Detected method:
S
Validation methods:

RNA-seq; Nuclear-Cytoplasmic Fractionation; Survival Analysis; Clinical Sample Validation

Clinical significance:

High circCDYL expression is associated with a significantly lower risk of progression in NMIBC (independent of the linear transcript and host gene).

Description:

circCDYL is upregulated in the less aggressive NMIBC risk class and higher expression predicts a lower risk of progression independently of the linear transcript and host gene. It is mainly localized in the cytoplasm (detected in FL3 and T24 fractions), and the study reports no enrichment of SCEs or conserved miRNA binding sites for circCDYL.

Confidence score:

0.4679

Other information
Title:

Circular RNA expression is abundant and correlated to aggressiveness in early-stage bladder cancer.

Journal: NPJ genomic medicine
Published: 2017
PubMed ID: 29263845
Study type:

combined biological and clinical study

Data availability: EGAS00001001236; GSE100971
Code availability: -