circRNA basic information
circBase ID: hsa_circ_0090364
Name: hsa_circ_PHF16
Synonym: circPHF16
Host Gene: PHF16
Genomic location(hg19): chrX:46844284-46857679:+
Genomic location(hg38): chrX:46984883-46998277:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005364
MONDO name: Graves disease
Disease details: Graves' disease
Disease DO ID:
12361
Disease MeSH ID:
D006111
Disease NCIt ID:
C3071
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood mononuclear cells; serum; splenic CD4 + T lymphocytes; thyroid tissues

Cell lines:

Jurkat cells

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: IL6ST / Il6st, AGO2, IL-17A
Associated microRNA: miR-378a-3p
Biological function: circPHF16 promotes IL-17A expression and secretion by T lymphocytes/Jurkat cells and contributes to the immunopathological mechanism of Graves' disease.
Molecular mechanism: circPHF16 acts as a ceRNA/sponge for miR-378a-3p, thereby positively regulating IL6ST expression and promoting IL-17A expression and secretion; bioinformatic analysis implicated the JAK-STAT pathway.
Biological pathway or process:

ceRNA regulation (promotes); JAK/STAT (promotes); immune regulation (promotes); inflammation (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; ELISA; In Vivo Animal Model; H&E Staining; Bioinformatics Analysis

Clinical significance:

circPHF16 is identified as a potential target for new approaches to Graves' disease diagnosis and treatment.

Description:

circPHF16 is up-regulated in PBMCs and serum of Graves' disease patients and in splenic CD4+ T lymphocytes of GD model mice. It promotes IL-17A expression and secretion in Jurkat T cells by acting as a ceRNA that sequesters miR-378a-3p and up-regulates IL6ST, with predicted involvement of the JAK-STAT pathway. The study proposes circPHF16 as a potential diagnostic and therapeutic target for GD.

Confidence score:

0.8324

Other information
Title:

Circular RNA circPHF16 enhances IL-17A expression and secretion by sequestering miR-378a-3p to activate the IL6ST axis in Graves' disease.

Journal: Cytokine
Published: 2024
PubMed ID: 38963941
Study type:

combined biological and clinical study

Data availability: Data will be made available on request; Supplementary data: https://doi.org/10.1016/j.cyto.2024.156681
Code availability: -