circRNA basic information
circBase ID: -
Name: hsa_circ_TLK1
Synonym: circTLK1
Host Gene: TLK1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005229
MONDO name: bacterial infectious disease with sepsis
Disease details: septic cardiomyopathy
Disease DO ID:
0040085
Disease MeSH ID:
D016470
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

myocardial tissues

Cell lines:

HCMs

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: PARP1, HMGB1
Associated microRNA: miR-17-5p
Biological function: Aggravates oxidative mtDNA damage, mitochondrial dysfunction and cardiomyocyte apoptosis in septic cardiomyopathy.
Molecular mechanism: Acts as a miRNA sponge for miR-17-5p to enhance PARP1 expression, activating the PARP1/HMGB1 axis and promoting oxidative mtDNA damage.
Biological pathway or process:

apoptosis (promotes); mitochondrial function (inhibits); oxidative phosphorylation (inhibits); other pathway/process (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Transfection; CCK8; TUNEL; Annexin V/PI Flow Cytometry; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Co-IP; Western Blot; ELISA; IF (Immunofluorescence); In Vivo Animal Model

Clinical significance:

-

Description:

CircTLK1 is up-regulated in LPS-stimulated human cardiomyocytes and in septic rat myocardium. It promotes cardiomyocyte apoptosis by sponging miR-17-5p to increase PARP1, thereby activating the PARP1/HMGB1 axis and aggravating oxidative mtDNA damage and mitochondrial dysfunction.

Confidence score:

0.6331

Other information
Title:

CircTLK1 modulates sepsis-induced cardiomyocyte apoptosis via enhancing PARP1/HMGB1 axis-mediated mitochondrial DNA damage by sponging miR-17-5p.

Journal: Journal of cellular and molecular medicine
Published: 2021
PubMed ID: 34410682
Study type:

combined biological and clinical study

Data availability: All data generated or analysed during this study are included in this published article.
Code availability: -