circRNA basic information
circBase ID: hsa_circ_0000285
Name: hsa_circ_HIPK3
Synonym: circ_0000285
Host Gene: HIPK3
Genomic location(hg19): chr11:33362513-33363232:+
Genomic location(hg38): chr11:33340967-33341686:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissues; adjacent tissues

Cell lines:

SJSA1; U2OS; hFOB 1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IGFBP3, Ago2
Associated microRNA: miR-409-3p
Biological function: promotes proliferation, migration and invasion and inhibits apoptosis of osteosarcoma cells
Molecular mechanism: circ_0000285 acts as a miRNA sponge for miR-409-3p to upregulate IGFBP3
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; Clinical Sample Validation; In Vivo Animal Model

Clinical significance:

The expression of circ_0000285 was positively associated with tumor size.

Description:

circ_0000285 is up-regulated in osteosarcoma tissues and cell lines and mainly localizes to the cytoplasm. It promotes osteosarcoma cell proliferation, migration and invasion while inhibiting apoptosis by sponging miR-409-3p to upregulate IGFBP3, and its knockdown suppresses tumor growth in a xenograft model.

Confidence score:

0.7984

Other information
Title:

Circ_0000285 regulates proliferation, migration, invasion and apoptosis of osteosarcoma by miR-409-3p/IGFBP3 axis.

Journal: Cancer cell international
Published: 2020
PubMed ID: 33041662
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -