circRNA basic information
circBase ID: hsa_circ_0051488
Name: hsa_circ_ERCC1
Synonym: hsa_-circ_0051488
Host Gene: ERCC1
Genomic location(hg19): chr19:45916934-45917292:-
Genomic location(hg38): chr19:45413676-45414034:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005097
MONDO name: squamous cell lung carcinoma
Disease details: lung squamous cell carcinoma
Disease DO ID:
3907
Disease MeSH ID:
-
Disease NCIt ID:
C3493
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

lung cancer tissues; adjacent normal tissues; squamous cell carcinoma tissues; para-cancer tissues

Cell lines:

16HBE; A549; LK 2; 16HBE-T; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: SATB2, CRMP1, CXCR4
Associated microRNA: miR-6717-5p
Biological function: hsa_circ_0051488 functions as a tumor-suppressive circRNA in LUSC; its low expression is associated with more serious pathology, while overexpression reduces tumor cell proliferation, colony formation, migration, and invasion.
Molecular mechanism: hsa_circ_0051488 acts as a cytoplasmic competing endogenous RNA sponge for miR-6717-5p, thereby modulating SATB2 expression; SATB2 is linked to inhibition of tumor-related pathways and positive correlation with CRMP1.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (inhibits); migration (inhibits); invasion (inhibits); NF-kappaB (inhibits); oxidative phosphorylation (inhibits); other pathway/process (inhibits)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; MTT; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

Low hsa_circ_0051488 expression in cancer tissues is inversely correlated with tumor diameter, lymphatic metastasis, and TNM stage; low expression is related to more serious pathology.

Description:

hsa_circ_0051488 is an ERCC1-derived circRNA that is down-regulated in LUSC tissues and during BPDE-induced malignant transformation. It mainly localizes in the cytoplasm and suppresses LUSC-related malignant phenotypes by acting as a ceRNA sponge for miR-6717-5p, thereby regulating SATB2. Clinically, low hsa_circ_0051488 expression is associated with larger tumor diameter, lymphatic metastasis, and advanced TNM stage.

Confidence score:

0.7799

Other information
Title:

Benzo[a]pyrene diol epoxide-induced transformed cells identify the significance of hsa_circ_0051488, a ERCC1-derived circular RNA in pulmonary squamous cell carcinoma.

Journal: Molecular carcinogenesis
Published: 2021
PubMed ID: 34320692
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -