circRNA basic information
circBase ID: hsa_circ_0000517
Name: hsa_circ_RPPH1
Synonym: -
Host Gene: RPPH1
Genomic location(hg19): chr14:20811404-20811492:-
Genomic location(hg38): chr14:20343245-20343333:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent normal tissues; paracarcinoma tissues; serum; blood

Cell lines:

SNU-387

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TP53, MYC, AKT1
Associated microRNA: -
Biological function: associated with hepatocarcinogenesis and progression; carcinogenic role; prognostic biomarker potential
Molecular mechanism: predicted ceRNA/miRNA sponge network affecting target genes and pathways (in silico)
Biological pathway or process:

MAPK (other); Ras (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Sanger Sequencing; divergent primers PCR; Back-Splice Junction PCR / divergent primers PCR; Clinical Sample Validation; Survival Analysis; ROC Analysis; Cohort Study

Clinical significance:

high hsa_circ_0000517 expression was associated with adverse prognosis in HCC patients; higher expression was related to worse TNM stage; nomogram built on AFP and has_circ_0000517 showed prognostic value

Description:

hsa_circ_0000517 is up-regulated in HCC tumor tissues and its high expression is associated with worse OS/DFS and higher TNM stage. Bioinformatics analyses predict it acts as a miRNA sponge, influencing targets such as TP53, MYC and AKT1 and enriching MAPK/Ras-related pathways, supporting its potential as a prognostic biomarker.

Confidence score:

0.7278

Other information
Title:

Up-Regulation of hsa_circ_0000517 Predicts Adverse Prognosis of Hepatocellular Carcinoma.

Journal: Frontiers in oncology
Published: 2019
PubMed ID: 31750237
Study type:

combined biological and clinical study

Data availability: GSE97332; GSE94508
Code availability: -