circRNA basic information
circBase ID: -
Name: hsa_circ_CDR1
Synonym: CDR1as
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0021042
MONDO name: glioma
Disease details: glioma
Disease DO ID:
-
Disease MeSH ID:
D005910
Disease NCIt ID:
C3059
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

glioma tissues; normal brain tissues

Cell lines:

U87MG; LN229; HCT116 p53+/+; HCT116p53-/-; MEFp53-/-MDM2-/-; T98G; U251

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: p53, MDM2, AGO2, Dicer
Associated microRNA: miR-7
Biological function: Tumor suppressor in glioma/GBM: inhibits tumor growth, proliferation and colony formation; promotes G0/G1 arrest and apoptosis; protects cells from DNA damage.
Molecular mechanism: CDR1as directly binds p53 (DBD domain), disrupts p53/MDM2 complex formation, inhibits MDM2-mediated ubiquitination and degradation of p53, thereby stabilizing p53 protein (independent of miRNA sponge activity).
Biological pathway or process:

p53 signaling (promotes); proliferation (inhibits); cell cycle (inhibits); apoptosis (promotes); other pathway/process (other)

Detected method:
Q
H
S
Validation methods:

RIP (RNA Immunoprecipitation); RNA-seq; RT-qPCR; FISH / smFISH; IF (Immunofluorescence); circRIP; RNA Pull-Down; Western Blot; Co-IP; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; ROC Analysis; Bioinformatics Analysis; Clinical Sample Validation; Cohort Study

Clinical significance:

CDR1as is an independent predictor of overall survival in glioma/GBM; lower expression in higher WHO grade; positively correlated with overall survival; AUC > 0.7 for predicting hazard rate.

Description:

CDR1as is down-regulated in glioma/GBM and acts as a tumor suppressor. It binds p53 (via the DBD), disrupts p53/MDM2 complex formation, reduces p53 ubiquitination, stabilizes p53 protein and enhances p53 pathway activity, leading to reduced glioma cell growth and increased cell-cycle arrest/apoptosis, including under DNA damage.

Confidence score:

0.8424

Other information
Title:

Circular RNA CDR1as disrupts the p53/MDM2 complex to inhibit Gliomagenesis.

Journal: Molecular cancer
Published: 2020
PubMed ID: 32894144
Study type:

combined biological and clinical study

Data availability: Additional files; CGGA (http://www.cgga.org.cn/); TCGA in UCSC Xena; GTEx; GEPIA
Code availability: -