circRNA basic information
circBase ID: hsa_circ_0028129
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr12:109687788-109696913:+
Genomic location(hg38): chr12:109249983-109259108:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; background normal liver tissues; tumour specimens; para-tumour normal background liver tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: not specified
Biological pathway or process:

not specified
Detected method:
S
Validation methods:

RNA-seq
Clinical significance:

-
Description:

hsa_circ_0028129 was identified by high-throughput RNA-seq as down-regulated in HCC tissues compared with paired background normal liver tissues, but its down-regulation was not reported as confirmed by qPCR or linked to prognosis in the main text.
Confidence score:

0.1155
Other information
Title:

Genome-wide identification and characterization of circular RNA in resected hepatocellular carcinoma and background liver tissue.

Journal: Scientific reports
Published: 2021
PubMed ID: 33727578
Study type:

combined biological and clinical study
Data availability: Supplementary material available at 10.1038/s41598-021-85237-y.
Code availability: -