circRNA basic information
circBase ID: hsa_circ_0025129
Name: hsa_circ_TNFRSF1A
Synonym: -
Host Gene: TNFRSF1A
Genomic location(hg19): chr12:6450941-6451283:-
Genomic location(hg38): chr12:6341775-6342117:-
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma exosomes; serum exosomes; HCC tissue; tumor tissues; para-carcinoma tissues

Cell lines:

HepG2; Hepa 1-6; 3T3L1; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: USP7, Cyclin A2
Associated microRNA: miR-34a
Biological function: Promotes HCC growth/proliferation, migration and metastasis, and reduces DNA damage.
Molecular mechanism: Exosomal circ-DB functions as a miRNA sponge for miR-34a, leading to activation of USP7 and downstream Cyclin A2 deubiquitination signaling.
Biological pathway or process:

proliferation (promotes); migration (promotes); metastasis (promotes); ubiquitination (inhibits); cell cycle (promotes); apoptosis (not specified); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Transfection; Luciferase Reporter Assay; Western Blot; RNA Pull-Down; EdU Staining; Transwell Assay; IF (Immunofluorescence); In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Plasma exosomal circ-DB is upregulated in HCC patients with higher body fat ratio and correlates with miR-34a and USP7 expression.

Description:

Exosomal circ-DB (hsa_circ_0025129, from TNFRSF1A) is upregulated in HCC patients with higher body fat ratio. It promotes HCC proliferation/migration/metastasis and reduces DNA damage by sponging miR-34a, thereby increasing USP7 and activating the USP7/Cyclin A2 deubiquitination signaling axis.

Confidence score:

0.7756

Other information
Title:

Exosome circRNA secreted from adipocytes promotes the growth of hepatocellular carcinoma by targeting deubiquitination-related USP7.

Journal: Oncogene
Published: 2019
PubMed ID: 30546088
Study type:

combined biological and clinical study

Data availability: -
Code availability: -