circRNA basic information
circBase ID: hsa_circ_0001989
Name: hsa_circ_SPG20
Synonym: -
Host Gene: SPG20
Genomic location(hg19): chr13:36886281-36886614:-
Genomic location(hg38): chr13:36312144-36312477:-
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
 10534
Disease MeSH ID:
 -
Disease NCIt ID:
 C9331
Disease ICD11 ID:
 1397617262
Disease OMIM ID:
 613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma exosomes / plasma
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
S
Validation methods:

RNA-seq
Clinical significance:

-
Description:

hsa_circ_0001989 was identified by RNA-seq as downregulated in plasma exosomes from gastric cancer patients compared with healthy controls. No circRNA-specific functional or mechanistic validation was reported for this circRNA.
Confidence score:

0.1155
Other information
Title:

Circular RNA profiling in plasma exosomes from patients with gastric cancer.

Journal: Oncology letters
Published: 2020
PubMed ID: 32765789
Study type:

combined biological and clinical study
Data availability: available from the corresponding author on reasonable request
Code availability: -