circRNA basic information
circBase ID: hsa_circ_0006156
Name: hsa_circ_FNDC3B
Synonym: circFNDC3B
Host Gene: FNDC3B
Genomic location(hg19): chr3:171965322-171969331:+
Genomic location(hg38): chr3:172247532-172251541:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; adjacent noncancerous tissues

Cell lines:

T24; UM-UC-3; SV-HUC-1; HEK-293 T; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: G3BP2, SRC, FAK
Associated microRNA: miR-1178-3p
Biological function: inhibits proliferation, migration and invasion; suppresses tumor growth and lymphatic metastasis
Molecular mechanism: circFNDC3B acts as a miR-1178-3p sponge to suppress G3BP2, thereby inhibiting downstream SRC/FAK signaling
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); metastasis (inhibits); SRC/FAK signaling (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Western Blot; IHC (Immunohistochemistry); H&E Staining; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circFNDC3B was correlated with pathological T stage, grade, lymphatic invasion and patients’ overall survival rate; low circFNDC3B expression exhibited poorer survival

Description:

circFNDC3B (hsa_circ_0006156), derived from FNDC3B, is down-regulated in bladder cancer and acts as a tumor suppressor. It sponges miR-1178-3p to reduce G3BP2 and inactivate SRC/FAK signaling, thereby inhibiting proliferation, migration/invasion, tumor growth and lymphatic metastasis; low circFNDC3B is associated with poorer overall survival.

Confidence score:

0.8837

Other information
Title:

Invasion-related circular RNA circFNDC3B inhibits bladder cancer progression through the miR-1178-3p/G3BP2/SRC/FAK axis.

Journal: Molecular cancer
Published: 2018
PubMed ID: 30458784
Study type:

combined biological and clinical study

Data availability: 10.1186/s12943-018-0908-8; Additional file 1: Table S1
Code availability: -