circRNA basic information
circBase ID: hsa_circ_0001531
Name: -
Synonym: circ_0001531
Host Gene: -
Genomic location(hg19): chr5:132426884-132428481:+
Genomic location(hg38): chr5:133091192-133092789:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

whole blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: QKI, EGFR, BCL2L1, PTPN11
Associated microRNA: miR-1236-3p, miR-129-5p, miR-141-5p, miR-205-5p, miR-29a-5p, miR-942-5p
Biological function: Potential noninvasive diagnostic biomarker for breast cancer; may participate in a circRNA-miRNA-mRNA regulatory network involved in cancer development and progression.
Molecular mechanism: Predicted circRNA-miRNA-mRNA regulatory network based on miRanda, MirTarget, STRING, Cytoscape and KEGG pathway analysis.
Biological pathway or process:

ceRNA regulation (other); autophagy (other); NF-kappaB (other); JAK/STAT (other); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circ_0001531 had diagnostic potential for breast cancer, with AUC 0.8258 in the discovery cohort, 0.9094 in the validation cohort and 0.8595 in the combined cohort.

Description:

circ_0001531 was significantly up-regulated in whole blood from breast cancer patients and showed diagnostic value in ROC analyses. The study suggests circ_0001531 may act as part of a predicted circRNA-miRNA-mRNA network and may contribute to breast cancer-related regulatory processes, but functional mechanisms were not experimentally validated.

Confidence score:

0.459

Other information
Title:

Elevated circRNAs circ_0000745, circ_0001531 and circ_0001640 in human whole blood: Potential novel diagnostic biomarkers for breast cancer.

Journal: Experimental and molecular pathology
Published: 2021
PubMed ID: 34139239
Study type:

combined biological and clinical study

Data availability: All data generated or analyzed during this study are included in this published article and its supplementary information files.
Code availability: -