circRNA basic information
circBase ID: -
Name: hsa_circ_FADS2
Synonym: hsa_circRNA_100833
Host Gene: FADS2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008903
MONDO name: lung cancer
Disease details: lung cancer
Disease DO ID:
1324
Disease MeSH ID:
-
Disease NCIt ID:
C7377
Disease ICD11 ID:
-
Disease OMIM ID:
211980
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent nontumor tissues / normal lung tissue

Cell lines:

A549; H1299; SK-MES-1; NCI-H1975; NHOst; HEK-293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-498
Biological function: Promotes NSCLC cell proliferation, migration and invasion; associated with advanced TNM stage, lymph node metastasis, poor differentiation and shorter overall survival.
Molecular mechanism: Acts as a miRNA sponge for miR-498; circFADS2 inhibition increases miR-498 and miR-498 inhibitors rescue the phenotypes.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; divergent primers PCR; RNase R Treatment; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; CCK8; Wound Healing Assay; Transwell Assay

Clinical significance:

High expression of circFADS2 was associated with advanced TNM stage, lymph node metastasis, poor differentiation, and shorter overall survival in NSCLC patients.

Description:

circFADS2 (hsa_circRNA_100833, host gene FADS2) is up-regulated in NSCLC tissues and cell lines and promotes proliferation, migration and invasion. Mechanistically, it sponges miR-498 as supported by binding-site prediction, luciferase assays and rescue experiments with miR-498 inhibitors, and its high expression is associated with shorter overall survival.

Confidence score:

0.814

Other information
Title:

circFADS2 regulates lung cancer cells proliferation and invasion via acting as a sponge of miR-498.

Journal: Bioscience reports
Published: 2018
PubMed ID: 29700215
Study type:

combined biological and clinical study

Data availability: -
Code availability: -