circRNA basic information
circBase ID: hsa_circ_0140117
Name: -
Synonym: circ_0140117
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; tumour tissues; adjacent tumour tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: AFP
Associated microRNA: -
Biological function: Potential circulating biomarker/fingerprint to distinguish HCC from CH or healthy controls; decreases after hepatectomy suggesting tumor origin.
Molecular mechanism: Not established; diagnostic biomarker evaluation with ROC and risk score analysis.
Biological pathway or process:

not specified

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; ROC Analysis; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Candidate circulating fingerprint/biomarker for distinguishing HCC from CH or healthy controls; combination with AFP improves diagnostic performance.

Description:

circ_0140117 is up-regulated in plasma (and tumor tissue) of HBV-related HCC patients versus CH or healthy controls, and decreases after hepatectomy. It is a candidate circulating biomarker/fingerprint whose combination with AFP yields higher diagnostic sensitivity and specificity.

Confidence score:

0.5963

Other information
Title:

Circulating circRNA predicting the occurrence of hepatocellular carcinoma in patients with HBV infection.

Journal: Journal of cellular and molecular medicine
Published: 2020
PubMed ID: 32692470
Study type:

combined biological and clinical study

Data availability: ArrayExpress: E-MTAB-8799
Code availability: -