circRNA basic information
circBase ID: hsa_circ_0000284
Name: hsa_circ_HIPK3
Synonym: -
Host Gene: HIPK3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; matched normal gastric epithelial tissues

Cell lines:

XGC-1; XGC-2; GES-1; MGC-803; BGC-823

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: COL1A1, COL4A1, CDK6
Associated microRNA: miR-124, miR-29b
Biological function: Promotes GC cell proliferation; associated with aggressive characteristics (T stage; Ming’s classification).
Molecular mechanism: Negative regulation of miR-124 and miR-29b (ceRNA/miRNA sponge-based network) affecting downstream targets (e.g., COL1A1, COL4A1, CDK6) in cancer-related pathways.
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Transfection; CCK8; Sanger Sequencing; Bioinformatics Analysis

Clinical significance:

circHIPK3 expression is associated with T stage and Ming’s classification; proposed as a potential biomarker in histological classification of GC.

Description:

circHIPK3 is up-regulated in gastric cancer and correlates with aggressive clinicopathological features (T stage and Ming’s classification). Functionally, it promotes GC cell proliferation and is linked to a circHIPK3-miR-124/miR-29b regulatory network affecting downstream targets such as COL1A1, COL4A1 and CDK6.

Confidence score:

0.6102

Other information
Title:

Regulatory network of circRNA-miRNA-mRNA contributes to the histological classification and disease progression in gastric cancer.

Journal: Journal of translational medicine
Published: 2018
PubMed ID: 30068360
Study type:

combined biological and clinical study

Data availability: Additional file 1: Table S1; Additional file 2: Fig. S1; Additional file 3: Fig. S2; Additional file 4: Table S2; Additional file 5: Fig. S3
Code availability: -