circRNA basic information
circBase ID: hsa_circ_0000376
Name: -
Synonym: circRNA_000554
Host Gene: -
Genomic location(hg19): chr12:11199618-11248400:-
Genomic location(hg38): chr12:11047019-11095801:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

clinical BC tissues; cancer tissue samples; adjacent normal tissues; tumors of mice

Cell lines:

MCF-10A; MDA-MB-231; SUM-159; MCF-7; SK-BR-3; MDA-MB-157; HEK 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: ZFP36, Ago2
Associated microRNA: miR-182 / hsa-miR-182-5p
Biological function: Suppresses epithelial-mesenchymal transition, cell invasion, migration, cell cycle progression, and tumor growth; promotes apoptosis and autophagy in breast cancer cells.
Molecular mechanism: circRNA_000554 acts as a ceRNA sponge for miR-182, thereby relieving miR-182-mediated repression of ZFP36 and blocking EMT in breast cancer.
Biological pathway or process:

EMT (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); autophagy (promotes); cell cycle (inhibits); ceRNA regulation (other); proliferation (inhibits)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; IF (Immunofluorescence); Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis

Clinical significance:

Higher circRNA_000554 expression was associated with better prognosis and survival in breast cancer patients.

Description:

circRNA_000554 is down-regulated in breast cancer tissues and cell lines, and higher expression is associated with better patient survival. Functionally, circRNA_000554 suppresses EMT, migration, invasion, and xenograft tumor growth while promoting apoptosis and autophagy. Mechanistically, cytoplasmic circRNA_000554 sponges miR-182 to upregulate ZFP36, forming a circRNA_000554/miR-182/ZFP36 tumor-suppressive axis.

Confidence score:

0.8769

Other information
Title:

Circular RNA 000554 represses epithelial-mesenchymal transition in breast cancer by regulating microRNA-182/ZFP36 axis.

Journal: FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Published: 2020
PubMed ID: 32729957
Study type:

combined biological and clinical study

Data availability: GSE101123; GSE45666; GSE97811; GSE50428; GSE26910; GSE3744; GEO; CircInteractome; starBase; miRDB; TargetScan; miRWalk; mirDIP; RNA22
Code availability: -