circRNA basic information
circBase ID: hsa_circ_0001522
Name: hsa_circ_CSNK1G3
Synonym: circCSNK1G3
Host Gene: CSNK1G3
Genomic location(hg19): chr5:122881110-122893258:+
Genomic location(hg38): chr5:123545416-123557564:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; adjacent normal lung tissues; xenograft tumor samples

Cell lines:

A549; H1299; H460; H2228; BEAS-2B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HOXA10
Associated microRNA: miR-143-3p
Biological function: Promotes LUAD cell proliferation, migration, invasion, tumor growth and metastasis; inhibits apoptosis.
Molecular mechanism: circCSNK1G3 acts as a miR-143-3p sponge to suppress miR-143-3p and induce HOXA10 signaling, thereby promoting LUAD progression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); ceRNA regulation (promotes); other pathway/process (promotes)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; FISH / smFISH; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

circCSNK1G3 expression was related to pathologic stage, tumor size and lymph node metastasis, suggesting potential prognostic value in LUAD.

Description:

circCSNK1G3 (hsa_circ_0001522) is up-regulated in LUAD tissues and cell lines and functions as an oncogenic circRNA. It is predominantly cytoplasmic and promotes LUAD proliferation, migration, invasion, metastasis and xenograft tumor growth by sponging hsa-miR-143-3p and enhancing HOXA10 signaling. Its expression is associated with pathologic stage, tumor size and lymph node metastasis.

Confidence score:

0.8399

Other information
Title:

Circular RNA circCSNK1G3 induces HOXA10 signaling and promotes the growth and metastasis of lung adenocarcinoma cells through hsa-miR-143-3p sponging.

Journal: Cellular oncology (Dordrecht, Netherlands)
Published: 2021
PubMed ID: 33118120
Study type:

combined biological and clinical study

Data availability: TCGA; https://www.cancer.gov/tcga; TCGA-LUAD; https://portal.gdc.cancer.gov/projects/TCGA-LUAD
Code availability: -