circRNA basic information
circBase ID: hsa_circ_0001806
Name: hsa_circ_CSPP1
Synonym: circCSPP1
Host Gene: CSPP1
Genomic location(hg19): chr8:68018139-68028357:+
Genomic location(hg38): chr8:67105904-67116122:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0024331
MONDO name: colorectal carcinoma
Disease details: colorectal carcinoma
Disease DO ID:
0080199
Disease MeSH ID:
-
Disease NCIt ID:
C2955
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent non-tumorous tissues / adjacent mucosal tissues

Cell lines:

HT29; SW480; DLD-1; LOVO; HCT116; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: COL1A1
Associated microRNA: miR-193a-5p / hsa-miR-193a-5p
Biological function: promotes migration and invasion; promotes EMT; promotes liver metastasis
Molecular mechanism: ceRNA mechanism: circCSPP1 sponges miR-193a-5p to upregulate COL1A1, promoting EMT and metastasis
Biological pathway or process:

EMT (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; Transwell Assay; Western Blot; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Clinical Sample Validation; Cohort Study; Survival Analysis; RNA-seq

Clinical significance:

upregulation was correlated with a higher M stage; high circCSPP1 expression was associated with lower overall survival; circCSPP1 was an independent prognostic factor for CRC patients

Description:

circCSPP1 (hsa_circ_0001806) is up-regulated in colorectal carcinoma and promotes EMT, migration/invasion, and liver metastasis. It acts as a ceRNA by sponging miR-193a-5p to relieve repression of COL1A1, increasing COL1A1 expression and EMT marker changes. High circCSPP1 is associated with higher M stage and worse overall survival in the patient cohort.

Confidence score:

0.8734

Other information
Title:

CircCSPP1 Functions as a ceRNA to Promote Colorectal Carcinoma Cell EMT and Liver Metastasis by Upregulating COL1A1.

Journal: Frontiers in oncology
Published: 2020
PubMed ID: 32612946
Study type:

combined biological and clinical study

Data availability: GSE126094; https://portal.gdc.cancer.gov/
Code availability: -