circRNA basic information
circBase ID: hsa_circ_0003602
Name: hsa_circ_SMARCC1
Synonym: circSMARCC1
Host Gene: SMARCC1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent tissues

Cell lines:

SW620; HCT116; HT29; SW480; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MMP-2, MMP-9, VEGF
Associated microRNA: miR-140-3p
Biological function: Promotes CRC cell viability/proliferation, migration and invasion; enhances MMP-2/MMP-9/VEGF expression.
Molecular mechanism: Acts as a miRNA sponge (ceRNA) binding miR-140-3p, leading to regulation of MMP-related markers (MMP-2, MMP-9) and VEGF.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; Clinical Sample Validation; Bioinformatics Analysis; In Vivo Animal Model

Clinical significance:

Potential biomarker/therapeutic target for CRC.

Description:

circSMARCC1 is up-regulated in colorectal cancer tissues/cell lines and promotes proliferation, migration and invasion. Mechanistically, it sponges miR-140-3p and regulates MMP-related markers (MMP-2/MMP-9) and VEGF, forming a circSMARCC1/miR-140-3p/MMPs axis with potential biomarker/therapeutic relevance.

Confidence score:

0.8119

Other information
Title:

CircRNA SMARCC1 Sponges MiR-140-3p to Regulate Cell Progression in Colorectal Cancer.

Journal: Cancer management and research
Published: 2020
PubMed ID: 32606978
Study type:

combined biological and clinical study

Data availability: -
Code availability: -