circRNA basic information
circBase ID: hsa_circ_0023919
Name: hsa_circ_PICALM
Synonym: -
Host Gene: PICALM
Genomic location(hg19): chr11:85707868-85714494:-
Genomic location(hg38): chr11:85996825-86003451:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004976
MONDO name: amyotrophic lateral sclerosis
Disease details: Amyotrophic lateral sclerosis
Disease DO ID:
332
Disease MeSH ID:
D000690
Disease NCIt ID:
C34373
Disease ICD11 ID:
1982355687
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

leukocyte samples; Peripheral blood mononuclear cells (PBMCs)

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa-miR-9
Biological function: Potential blood-based diagnostic biomarker (AUC > 0.950, sensitivity/specificity > 90%); negatively associated with age at time of blood collection.
Molecular mechanism: Predicted miRNA sponge via binding sites for hsa-miR-9; functional association proposed but not experimentally validated.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

AUC over 0.950 with sensitivity and specificity over 90% for ALS diagnosis; negatively associated with age at time of blood collection.

Description:

hsa_circ_0023919 (PICALM-derived) is down-regulated in ALS blood leukocytes/PBMCs and shows strong diagnostic potential (AUC > 0.95). It is predicted to contain binding sites for hsa-miR-9, suggesting a possible miRNA-sponge relationship, but this mechanism is not functionally validated in the study.

Confidence score:

0.5963

Other information
Title:

Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis.

Journal: Molecular neurobiology
Published: 2019
PubMed ID: 31175544
Study type:

combined biological and clinical study

Data availability: -
Code availability: -