circRNA basic information
circBase ID: hsa_circ_0007290
Name: hsa_circ_FUNDC1
Synonym: -
Host Gene: FUNDC1
Genomic location(hg19): chrX:44383247-44386611:-
Genomic location(hg38): chrX:44524001-44527365:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005098
MONDO name: stroke disorder
Disease details: stroke associated infection
Disease DO ID:
-
Disease MeSH ID:
D020521
Disease NCIt ID:
C3390
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: platelets, neutrophils, WBC
Associated microRNA: -
Biological function: Acts as a circulating biomarker/predictor for stroke associated infection in acute ischemic stroke patients; associated with neutrophil counts and platelet enrichment.
Molecular mechanism: Mechanism not experimentally established; discussion suggests possible host-gene/mitophagy-related involvement.
Biological pathway or process:

immune regulation (other); mitochondrial function (other); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; ROC Analysis; Survival Analysis; Cohort Study; Bioinformatics Analysis

Clinical significance:

Elevated plasma circFUNDC1 predicts occurrence of SAI in AIS patients; improves ROC/AUC when added to clinical risk model; Kaplan-Meier curves showed significant differences for SAI occurrence and 90-day survival between high vs low circFUNDC1 groups.

Description:

In plasma from AIS patients, circFUNDC1 is higher in those who develop stroke-associated infection and provides modest predictive value (ROC/AUC) that slightly improves a clinical risk model. circFUNDC1 levels correlate with platelet counts and neutrophil counts, suggesting these cells may contribute to elevated circulating circFUNDC1 in SAI.

Confidence score:

0.5339

Other information
Title:

Circular RNA FUNDC1 improves prediction of stroke associated infection in acute ischemic stroke patients with high risk.

Journal: Bioscience reports
Published: 2020
PubMed ID: 32537657
Study type:

combined biological and clinical study

Data availability: -
Code availability: -